AI for Drug Discovery and Development

Harness the Power of Artificial Intelligence and Machine Learning to Maximize and Accelerate Drug Discovery and Development Pipeline Efforts

May 17 - 18, 2023 ALL TIMES EDT

The AI for Drug Discovery and Development track will discuss opportunities and challenges that biopharma organizations are experiencing in harnessing the power of artificial intelligence and machine learning technologies to maximize and accelerate drug discovery and development efforts from early-stage to adoption to practical application. Speakers will explore the role of AI in transforming disease understanding and target ID, approaches using AI and human expertise to help identify and deliver validated targets, as well as enhancements to chemical drug design and precision medicine. We will also explore how AI/ML efforts compare to tried-and-true successful discovery (drugs-to-market) methods.

Monday, May 15

– 6:00 pm Hackathon*8:00 am

*Separate Complimentary Registration Required, see Hackathon page to submit your project OR register to participate

– 5:00 PM Registration Open – Come Early and Avoid the Lines2:00 pm

Tuesday, May 16

Registration Open7:00 am

Recommended Pre-Conference Workshops and Symposia*8:00 am

On Tuesday, May 16, 2023 Cambridge Healthtech Institute is pleased to offer nine pre-conference workshops scheduled across three time slots (8:00-10:00 am, 10:30 am-12:30 pm, and 1:45-3:45 pm) and two Symposia from 8:25 am-3:45 pm. All are designed to be instructional, interactive and provide in-depth information on a specific topic. They allow for one-on-one interaction and provide a great way to explain more technical aspects that would otherwise not be covered during the main conference tracks that take place Wednesday-Thursday.

*Separate registration required. For details, see Workshop agendas, FAIR Data Symposium agenda, and Knowledge Graphs Symposium agenda.

– 3:45 pm Hackathon*8:00 am

*Separate Complimentary Registration Required, see Hackathon page to submit your project OR register to participate

Refreshment Break and Transition to Plenary Keynote3:45 pm

PLENARY KEYNOTE PROGRAM

4:00 pm

Plenary Keynote Organizer's Remarks

Cindy Crowninshield, Executive Event Director, Cambridge Healthtech Institute

4:05 pm

Innovative Practices Awards

Joseph Cerro, Independent Consultant

Chris Dwan, Independent Consultant, Dwan, LLC

Allison Proffitt, Editorial Director, Bio-IT World

The Innovative Practices Awards recognizes and celebrates innovation that advances life sciences research. Bio-IT World is currently accepting entries for the 2023 Innovative Practices Awards, a competition designed to recognize partnerships and projects pushing our industry forward. Winners will be announced in mid-April 2023, recognized during the Tuesday May 16 Plenary Keynote Program, and scheduled to give a 30-minute podium presentation about their project during the conference. The deadline for entry is March 3, 2023. For more details about the Awards and to submit an application, visit the official Bio-IT World Innovative Practices Awards page: https://www.bio-itworld.com/Award/.

4:20 pm Plenary Keynote Introduction

David Gosalvez, PhD, Executive Director, Strategy & Informatics Portfolio, Revvity Signals

4:30 pm PLENARY KEYNOTE PRESENTATION:

The Promise of Data, Analytics, and Technology: Fueling Scientific and Medical Breakthroughs

Anastasia Christianson, PhD, Vice President, Global Head of AI, ML, Analytics, and Data, Pfizer Inc.

Edward Cox, Head & General Manager, Digital Health & Medicines (DHM), Pfizer Inc.

The 21st century has been referred to as the Century of Biology. With 90% of the world’s 97 zettabytes of data generated in the past 2 years and 30% of today’s data being healthcare related, how are we using data technology and advanced analytics (artificial intelligence, machine learning, and deep learning) to advance our understanding of disease and deliver “breakthroughs that change patients' lives?”

Welcome Reception in the Exhibit Hall with Poster Viewing5:45 pm

Close of Day7:00 pm

Wednesday, May 17

Registration and Morning Coffee7:00 am

PLENARY KEYNOTE PROGRAM

8:00 am

Plenary Keynote Organizer's Remarks

Allison Proffitt, Editorial Director, Bio-IT World

8:05 am PLENARY KEYNOTE INTRODUCTION:

Life Science Automation Opportunities – So Many Options, So Little Time

Santanu Sen, Vice President, Healthcare & Life Sciences, Virtusa

The COVID pandemic has demonstrated that therapies and vaccines can be developed in 18 months with a high degree of safety and efficacy. Pioneering work done by companies involved has shed light to archaic processes that have been in existence for decades with little need for change.  In this presentation, we will discuss collaborative efforts, enabling technologies, regulation, and workflow to automate these processes to advance personalized medicine initiatives.

8:15 am PLENARY KEYNOTE PRESENTATION:

Federated Futures: How the Largest Federated Learning Effort in Medicine Will Inform Our Next Steps

Spyridon Bakas, PhD, Assistant Professor, Radiology & Pathology and Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania

Raymond Y. Huang, MD, PhD, Division Chief, Neuroradiology, Brigham and Women’s Hospital; Associate Professor of Radiology, Harvard Medical School

Jason Martin, Principal Engineer AI Research Science, Security Solutions Lab, Intel Labs

Is a federated learning model sufficient to handle data from 71 institutions and more than 6,000 patients located on six continents? Researchers from Penn Medicine and Intel Labs say yes. An interdisciplinary team created the largest to-date global federated learning effort to develop an accurate and generalizable machine learning model for detecting glioblastoma borders. We will share what we learned about creating and maintaining such a federation, how the software infrastructure evolved over the course of the study, and how this work will empower the future of high-quality, precision clinical care worldwide.

Coffee Break in the Exhibit Hall with Poster Viewing9:30 am

Organizer's Welcome Remarks10:15 am

FINDING A BALANCE BETWEEN ACCURATE MEDICINE AND PRECISION MEDICINE TO IMPROVE DRUG DEVELOPMENT AND OPTIMIZE PATIENT TREATMENT

10:20 am

Chairperson's Remarks

Iman Tavassoly, MD, PhD, Senior Director, C2i Genomics

10:25 am

Next-Generation Phenotyping: Disease is a Process, Not a State

Anastasia Christianson, PhD, Vice President, Global Head of AI, ML, Analytics, and Data, Pfizer Inc.

Steven E. Labkoff, MD, Global Head, Clinical & Healthcare Informatics, Quantori

Michael Liebman, PhD, Managing Director, IPQ Analytics, LLC

Currently, phenotypes represent a set of observable characteristics that are associated with a diagnosis, response to treatment, outcome, etc. to define a diagnosis or treatment paradigm; however, disease is a process and not a state. We have been developing "next-generation phenotyping" that analyzes patient groups that progress similarly over time, in high dimensional space, that enables current diagnoses to be further stratified for use in diagnosis, treatment and research. By attending this talk, you will understand: 1) the importance of treating disease as a process and not a state, 2) methods that enable stratification of complex and common diseases, 3) opportunities to improve target selection for drug discovery, and 4) methods for "recovering" failed clinical trials.

11:55 am Digital Solution to Reduce Adverse Drug Reactions in All Healthcare Situations

Mark J. Kupersmith, MD, Managing Partner, SafeTherapeutics

Yev Monisova, Manager, Life Sciences Practice, Kanda Software

The SafeTherapeutics Platform is the first product that healthcare professionals can use to instantly identify potential adverse drug reactions in any clinical setting.  The proprietary database, which is updated quarterly, uses AI to process all publicly available studies organized by level of evidence. The application requires no training to use and is the only up to date product that is patient problem centric and provides actionable data based on real evidence.

12:25 pm Accelerating Drug Discovery with Expert Curated Data from QIAGEN

Venkatesh Moktali, PhD, Director of Product Management, QIAGEN Digital Insights

Join us for an informative discussion on the crucial role of high-quality data in AI/ML-powered drug discovery. Learn how direct access to high-quality curated data and biological relationships can transform integrated bioinformatics and data science to drive breakthroughs in drug discovery. Discover how QIAGEN's leading technologies and knowledge bases help our clients uncover previously inaccessible insights, and how we can optimize your drug discovery processes and accelerate your research.

12:40 pm Building and Visualizing a 3D Genome Model for Drug Target Identification

Diego Borges-Rivera, Vice President of Computational Biology, Dogodan Therapeutics, Inc.

Peter Bossier, Principal Architect, Zifo Technologies, Inc.

Chromatin loop extrusion shapes eukaryotic genomes, defining the physically-mediated transcriptional programs performed by the cell. We have applied a graph algorithm to partition the genome into Eukaryotic Genetic Neighborhoods (EGNs) which, when combined with our AI-enabled Genome Visual Studio (GVS), allows for a breakthrough 3D view of the human genome, generating hundreds of genetically-based therapeutic targets, including AKT1 for biologics and CHDR for small molecules, both against SCLC.

Session Break and Transition to Luncheon Presentation12:55 pm

1:05 pm LUNCHEON PRESENTATION:Enabling Faster Drug Discovery in the Cloud

Eyal David, Head of Cloud Strategy, WEKA

Baris Guler, HPC Practice Manager, Clovertex

Cryo-EM has emerged as a powerful tool for enabling rapid advances in drug discovery. The scale, simplicity, and economics of AWS promises to transform cryo-EM workflows even further. However, processing and analyzing large cryo-EM datasets in AWS requires the right architecture and the right data platform. Join this chat to learn how cryo-EM is impacting drug discovery and the main challenges that exist and why traditional storage approaches aren't meeting demands.

Refreshment Break in the Exhibit Hall with Poster Viewing1:50 pm

GROWTH OPPORTUNITIES IN TECH-ENABLED DRUG DISCOVERY AND DEVELOPMENT

2:35 pm

Chairperson's Remarks

Greg Caressi, Partner & Senior Vice President, Healthcare & Life Sciences, Frost & Sullivan, Inc.

2:40 pm

Growth Opportunities in Tech-Enabled Drug Discovery & Development

Greg Caressi, Partner & Senior Vice President, Healthcare & Life Sciences, Frost & Sullivan, Inc.

Pharmaceutical and biotech companies continue to bet big on AI applications across compound discovery, drug repurposing, and real-time analytics for patient-centric trial design and recruitment. The effective utilization of data and application of AI technologies for gaining insights and decision support will impact the complete value chain for drug discovery and development. Over the next five years, the industry can expect to cumulatively save as much as $50 billion with investments in AI-based products and solutions. This presentation will focus on the commercial aspects and call out unmet needs along with current & emerging applications of AI/ML within the sector. Benchmarking of the AI-enabled competencies of tech vendors will be followed by a brief assessment of the recent trends, growth opportunities, and strategic imperatives. An overview of the emerging ecosystem, partnerships, and selective case studies will be discussed. Key insights will be shared including: 1) themes driving AI application across the drug discovery & development value chain; 2) dynamics around regional trends, vendor eco-system, innovative business models, and game-changing companies, and 3) investment opportunities and growth potential.

CREATING PERSONALIZED THERAPEUTIC OPPORTUNITIES

3:10 pm

When is AI Not Overhyped? The Case of Removing the “Un” from Undruggable with AI/ML and Data

Johannes C. Hermann, PhD, Chief Technology Officer, Frontier Medicines

AI/ML in drug discovery has recently garnered hype and funding, with exciting academia and industry results. Yet, whether we have seen transformative value-generating breakthroughs is still a topic of debate. What is becoming clearer, is that AI/ML can make existing drug discovery processes better, more efficient, and also provide previously elusive insights. Here, we show how AI/ML, a key pillar in the Frontier platform, enables drugging the undruggable.

3:40 pm

Precision Drug Repositioning with High-Resolution Patient Stratification: Find New Treatments for Patients with Unmet Medical Needs

Simon Beaulah, Senior Vice President, Healthcare, PrecisionLife

Finding druggable targets for complex chronic diseases is particularly difficult using existing drug discovery approaches. This leaves significant pockets of patients with unmet medical needs, but also many opportunities to reposition active molecules originally designed to treat another disease, which acts on mechanisms relevant to the needs of currently ineffectively treated patients. High-resolution patient stratification based on combinatorial analytics offers an accurate and scalable route to map effective drugs to patient subgroups across multiple new disease indications.

4:10 pm From AI to Impact: How GPT Applications are Accelerating Drug Discovery

Yiannis Kiachopoulos, Co-Founder & CEO, Causaly

Discover the groundbreaking advancements AI and GPT applications offer in drug discovery research. Join Causaly's co-founder and CEO, Yiannis Kiachopoulos, at the Bio-IT World Conference for an insightful presentation on how GPT technology works, the key challenges and benefits, and how innovations like conversational interfaces with Knowledge Graphs will shape research in the future.

Best of Show Awards Reception in the Exhibit Hall with Poster Viewing4:40 pm

Close of Day6:00 pm

Thursday, May 18

Registration and Morning Coffee7:30 am

PLENARY KEYNOTE PROGRAM

8:00 am

Plenary Keynote Organizer's Remarks

Cindy Crowninshield, Executive Event Director, Cambridge Healthtech Institute

Plenary Keynote Sponsor Introduction (Opportunity Available)8:05 am

8:15 am PLENARY PANEL DISCUSSION:

Assessing Innovation: How Pharma Makes Tech Investment Decisions

PANEL MODERATOR:

Aaron Mann, CEO, Clinical Research Data Sharing Alliance

This panel session will assemble senior leaders who evaluate new technology adoption. We will hold an interactive discussion to help provide transparency in the evaluation and decision-making process for assessing and investing in new technologies. Themes we will cover include: 1) process for evaluating, piloting, and scaling new technologies and technology approaches; 2) how an organization evaluates an emerging technology vendor landscape; 3) when and how a formal buying process becomes required, and 4) identifying key stakeholders, decision-makers, and gatekeepers. 

PANELISTS:

April Bingham, Executive Director, Global Medical Compliance and Governance Chapter, Roche

Peter Mesenbrink, PhD, Executive Director, Biostatistics, Novartis Pharmaceuticals

Maria Palombini, Global Practice Leader, Healthcare & Life Sciences, IEEE Standards Association

Laszlo Vasko, Senior Director, Clinical Innovation R&D IT, Janssen Pharmaceuticals, Inc.

Coffee Break in the Exhibit Hall with Poster Viewing9:30 am

Organizer's Remarks10:15 am

DISCOVER NOVEL DRUG CANDIDATES TO PRODUCE BETTER PRECISION MEDICINES

10:20 am

Chairperson's Remarks

Joseph F. Donahue, Chief Business Officer, Aitia

10:25 am

Advances in Machine Learning Drive the Field of Generative Biology and New Protein TXs

Mark A. Brenckle, PhD, Head of Data and Platform Strategy, Generate Biomedicines

Protein-based therapeutics now make up approximately seventy percent of the pharmaceutical market and have made remarkable impacts on the lives of people affected by numerous different types of diseases. However, the field has been limited by what is observable in nature. Machine learning and artificial intelligence are helping to change that by elucidating the genetic code underlying the function of proteins and developing a generalizable set of rules and principles by which proteins are created and function. By combining machine learning with wet-lab research, Generate Biomedicines’ technology platform enables de novo antibodies, peptides, enzymes, cytokines, and other previously undiscoverable protein therapeutics to be rapidly developed at unprecedented speed and scale, potentially reducing the cost and time associated with therapeutic development. The speaker will discuss the important role of machine learning in the future of drug development and how Generate’s approach to generative biology could unlock the key to the medicines of the future. 

10:55 am

VirCAD: An HPC-Powered AI/ML BioCAD Platform for Viral Bioengineering

Stefan N. Lukianov, PhD, CEO, Technology, Salve Therapeutics, Inc.

Salve Therapeutics is developing a bioengineering software platform called VirCAD (Virus Computer-Aided Design) that will: 1) cost-effectively mine the human virome (and others) for new therapeutic modalities that will enable exploration of this therapeutic space; 2) discover novel drug candidates via the design, modeling, and simulation of novel viral particles in silico; 3) manufacture better viral delivery methods that would expand the available viral biologic tool kit to produce better precision medicines, and 4) help treat and potentially cure the many inherited and acquired.

11:25 am

In silico Cell Line Development

Stella Papadaki, PhD Student, Roche

In any antibody drug development campaign, there is an emphasis on identifying clones that can deliver high product titers at the desired quality. For the selection of highly productive, stable, and robust monoclonal cell lines able to serve both clinical phases and the market, a large number of clones have to be screened, filtered, and further processed, making the clone selection process very demanding in terms of resources and time. The recent advancement in AI and ML technologies has created the opportunity to predict the outcome of bioprocessing, promising a pipeline with widely applicable attributes. In this project, high-dimensional multi-omics data, derived from 1000 cell lines producing 11 different antibody formats, were collected while in a very early cultivation step of cell line development. The data library created, follows an effective strategy for annotation, storage, quality control, and data harmonization, to simplify a rapid data access framework suitable for multimodal computations. The final collection is utilized to develop ML methods for identifying early predictive marker networks by screening clonal profiles across various production batches in the early stage and analyzing their correlation to late-stage performance. Our approach aspires to transform cell line development into an in silico-based methodology, offering the benefits of lower experimental effort, process transparency, clear rationality behind decisions, and increased process robustness.

11:55 am AI-Based Early Warning System for Drug Discovery & Development

John Gregory, Strategic Advisor, i2e Consulting

Mohammed Azeem Shaikh, Practice Lead - Business Technical Consultant, i2e Consulting

Your R&D efforts are at risk due to market uncertainty and competitor moves. Having an early warning system will give your team the needed insights to combat such changes. Machine Learning-based systems can read thousands of articles and publicly available competitor information to provide recommendations that can form the base of R&D strategies. Join John Gregory & Azeem Shaikh to learn about ML-powered systems and their advantages for life science companies. 

12:25 pm

AI/ML Empowered Empirical-Driven MolecuLern Platform for Accelerating the Discovery & Development of Novel Small Molecule Therapeutics

David Bearss, PhD, CEO, Biolexis Therapeutics

At Biolexis, patients come first. Our MolecuLern platform is capable of developing new medicines for these patients at a fraction of the time and cost. MolecuLern is a proprietary, real/empirical deep learning protein hot-spot screening technology, with innovative human-in the loop learning workflows for predicting 40+ molecular properties. MolecuLern is uniquely suited for identifying and designing novel drug-like compositions of matter, by simultaneously prioritizing compounds based on selectivity, off-target profiles, and developable criteria, all with unprecedented speed and accuracy. The audience will learn how our MolecuLern technology is capable of developing novel small molecules, and how we differentiate ourselves from other AI/ML platforms.

Session Break and Transition to Luncheon Presentation12:55 pm

1:05 pm LUNCHEON PRESENTATION:Data-Driven Innovation & Accelerated Drug Discovery through AI & HPC

Ken Berta, Global Business Lead, Life Sciences, Unstructured Data Solutions, Dell Technologies

Life sciences and pharmaceutical companies can advance their research and create therapies faster than ever by deploying trained AI models that can rapidly identify potential drug molecules, design and build models, and predict therapeutic interactions and outcomes. Join us to learn how NVIDIA is developing cutting-edge AI tools powered by Dell Technologies. 

Refreshment Break in the Exhibit Hall with Poster Viewing1:50 pm

DISCOVER NOVEL DRUG CANDIDATES TO PRODUCE BETTER PRECISION MEDICINES

2:35 pm

Chairperson's Remarks

Gabriel Musso, PhD, Co-Founder & Chief Scientific Officer, BioSymetrics, Inc.

2:40 pm

AI and Machine Learning for Patient Selection

Xiong Sean Liu, PhD, Director, Data Science & Artificial Intelligence, Novartis

Selecting the right patients is a key aspect of drug development. This talk will discuss the use of AI and machine learning in selection of right patients, including natural language processing, structured query, classification, ranking algorithms, etc.

3:10 pm

Target Discovery and Validation using Clinical Insights, AI Predictions, and In Vivo Validation with Computer Vision

Gabriel Musso, PhD, Co-Founder & Chief Scientific Officer, BioSymetrics, Inc.

BioSymetrics uses a phenomics-driven, AI-powered approach to the discovery of novel targets in cardiovascular, neurological, and rare diseases. Our automated experimental platform validates target predictions in vivo using zebrafish and custom computer vision software that rapidly quantifies results. Learn modern rethinking of phenomic-driven target discovery that incorporates clinical data, public data, and experimental data to build translation up front. We will share platform technologies as well as applications to pipeline programs.

3:40 pm

Chemistry-Constrained Multi-Dimensional Library Enumeration for Hit Expansion in Computer-Aided Drug Design

Mike Fortunato, PhD, Principal Scientist, Novartis

In this work we describe a process for automatically expanding chemical space around a hit using validated multi-step chemistry and readily accessible building blocks. This multi-dimensional extension upon traditional one-dimensional library enumeration defines a large, but still computationally manageable search space to identify analogs with improved molecular properties. Using machine learning models trained on historical activity and ADME data, we can rapidly and efficiently explore local, accessible chemical space.

Close of Conference4:10 pm






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